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Table 4 Dandy walker malformation

From: The genetic basis of hydrocephalus: genes, pathways, mechanisms, and global impact

Citation

Title

Author affiliation

Case #

Ancestry

Study design

CNS phenotype

Non-CNS phenotype

Type of hydrocephalus

Genetic methodology

Genetic analysis

Inheritance

Genetic findings

Aldinger et al., 2009 [230]

FOXC1 is required for normal cerebellar development and is a major contributor to chromosome 6p25.3 Dandy-Walker malformation

University of Chicago, Chicago, Illinois, USA

18 Subjects, 2 Controls

-

Case series

Dandy walker—cerebellar malformations

Ocular abnormalities

Communicating

WES

Trio-based sequencing

De novo, maternal translocation, Mosaicism

6p25.3 (p.S82T and p.S131L in FOXC1)

Arora et al., 2019 [231]

Prenatal presentation of a rare genetic disorder: a clinical, autopsy and molecular correlation

Sir Ganga Ram Hospital. New Delhi, India

1 Subject

-

Case study

Dandy walker—cerebellar malformations, callosal agenesis

Talipes equinovarus, renal cysts

Communicating

WES

Trio-based sequencing

AR

9q31.2 (c.C411A. p. C137X in exon 5 of FKTN)

Chen et al., 2009 [232]

A 12 Mb deletion of 6p24.1– > pter in an 18-gestational-week fetus with orofacial clefting, the Dandy-Walker malformation and bilateral multicystic kidneys

Mackay Memorial Hospital, Taipei, Taiwan

1 Subject

-

Case study

Craniosynostosis

Tracheal stenosis, midface hypoplasia, ocular proptosis and digital malformations

Communicating

Cytogenetics

Karyotyping, aCGH

De novo

6pter/6p24.1 (12 Mb deletion)

Darbro et al., 2013 [233]

Mutations in extracellular matrix genes NID1 and LAMC1 cause autosomal dominant Dandy-Walker malformation and occipital cephaloceles

The University of Iowa, Iowa City, Iowa, USA

7 Subjects, 348 Controls

Indian, Vietnamese

Case study

Dandy walker malformation, variable cerebellar hypoplasia, meningeal anomalies, and occipital skull defects

-

-

WES

Massively parallel

sequencing, Sanger sequencing

AD

1q25.3 (c.C2237T, p.T746M in LAMC1); 1q42.3 (c.C1162T, p.Q388X in NID1)

Faqeih et al., 2017 [234]

Phenotypic characterization of KCTD3-related developmental epileptic encephalopathy

Children's Specialized Hospital, King Fahad Medical City, Riyadh, Saudi Arabian

7 Subjects

-

Case series

Seizures, poor muscle control and tone, dandy walker malformation

Renal distention, bilateral hip dislocation, scoliosis

Communicating

WES

Sanger Sequencing

De novo

1q41 (c.1036_1073del, p.P346Tfs*4; c.C166T, p.R56X in KCTD3)

Gai et al., 2016 [235]

Novel SIL1 nonstop mutation in a Chinese consanguineous family with Marinesco-Sjögren syndrome and Dandy-Walker syndrome

Central South University, 110 Xiangya Road, Changsha, Hunan 410,078, China

2 Subjects, Matched Controls used

Chinese

Case study

Mild intellectual disability, hypotonia, ataxia, dysarthria, strabismus, and dandy walker malformation

Cubitus valgus

-

WES

Sanger sequencing

AR

5q31.2 (nonstop mutation in SIL1)

Guo et al., 2020 [236]

Hypoglycemia and Dandy-Walker variant in a Kabuki syndrome patient: a case report

Xingtai People's Hospital, Xingtai, Hebei, China

1 Subject, 2 Parents

Chinese

Cases study

Dandy walker—cerebellar malformations

Persistent hypoglycemia, elongated palpebral fissures with eversion of the lower lateral eyelids and prominent ears

Communicating

WES

Sanger sequencing

De novo

12q13.12 (c.12165del, p.E4056Sfs*10 in exon 39 of KMT2D)

Jalali et al., 2008 [237]

Linkage to chromosome 2q36.1 in autosomal dominant Dandy-Walker malformation with occipital cephalocele and evidence for genetic heterogeneity

Northwestern University Feinberg School of Medicine, Chicago, IL, USA

19 Subjects

Vietnamese- American and Brazilian

Case series

Dandy walker malformation, occipital encephalocele

Prominent forehead, mildly downturned vermilion border of the upper lip, deep-set eyes and flat philtrum, minimal high frequency hearing loss

Communicating

TGS, cytogenetics

SNP genotyping, multipoint linkage analysis, G-banded karyotype

analysis and FISH

AD

2q36.1 (silent mutation of SGPP2; insertion/deletion 85 bp upstream of ACSL3 exon 4)

Liao et al., 2012 [238]

Prenatal diagnosis and molecular characterization of a novel locus for Dandy-Walker malformation on chromosome 7p21.3

Guangzhou Women and Children's Medical Center, Guangzhou Medical College, Guangzhou, Guangdong, China

4 Subjects

-

Case series

Dandy walker—cerebellar malformations

Ocular hypertelorism, cardiac anomalies, talipes valgus, syndactyly

-

WGS, cytogenetics

aCGH, FISH

De novo

7p21.3 (de novo adjacent microdeletion/duplication)

Linpeng et al., 2018 [239]

Diagnosis of Joubert Syndrome 10 in a Fetus with Suspected Dandy-Walker Variant by WES: A Novel Splicing Mutation in OFD1

Central South University, Changsha, Hunan, China

3 Subjects, 1 Control

Chinese

Case study

Hypoplastic cerebellum and absent vermis

Bilateral postaxial polydactyly

-

WES, cytogenetics

Karyotype; microarray; CNV; FISH; Sanger sequencing

Maternal

8q21 (4.9 Mb heterozygous deletion at 8q21.13-q21.3); Xp22.2 (c.T2488 + 2C, resulting in an abnormal skipping of exon 18 in OFD1)

MacDonald, Holden 1985 [240]

Duplication 12q24––qter in an infant with Dandy-Walker syndrome

Queen's University, Kingston, Ont., Canada

1 Subject

-

Case study

Dandy walker—cerebellar malformations

 

-

Cytogenetics

-

Paternal

12q24 (duplication 12q24 to qter)

Mademont-Soler et al., 2010 [241]

Description of the smallest critical region for Dandy-Walker malformation in chromosome 13 in a girl with a cryptic deletion related to t(6;13)(q23;q32)

Servei de Bioquímica i Genètica Molecular, Hospital Clínic, Barcelona, Spain

1 Subject, Controls used

-

Case study

Dandy walker—cerebellar malformations

Iris coloboma, profound hearing loss, and hyperlaxity of skin and joints

Obstructive

WGS, cytogenetics

G-banded chromosome analysis, aCGH, CNV analysis, FISH

De novo

Karyotype 46,XX,t(6;13)(q23;q32); 2.47 Mb deletion of band 13q32; 4 Mb deletion of 16q21

Matsukura et al., 2017 [242]

MODY3, renal cysts, and Dandy-Walker variants with a microdeletion spanning the HNF1A gene

Saiseikai Toyama Hospital

1 Subject

Japanese

Case study

Intellectual disability, dandy walker malformation

Glycosuria, developmental delay, renal cysts

-

TGS, cytogenetics

MLPA; direct sequencing, aCGH

De novo

5.6 Mb deletion of 12q24.22–12q24.31 in HNF1A

Mimaki et al., 2015 [243]

Holoprosencephaly with cerebellar vermis hypoplasia in 13q deletion syndrome: Critical region for cerebellar dysgenesis within 13q32.2q34

Graduate School of Medicine, The University of Tokyo, Japan

2 Subjects

-

Case series

Cerebellar hypoplasia, hypoplastic optic nerve

Upslanted palpebral fissures, hypertelorism, low-set malformed ears, a broad prominent nasal bridge, micrognathia, micropenis, hypospadias, bifid scrotum, and a low-level imperforate anus, ventral septal defect

Obstructive

Cytogenetics

G-banding, FISH, aCGH

De novo

13q32.3 (ZIC2 and ZIC5)

Shalata et al., 2019 [244]

Biallelic mutations in EXOC3L2 cause a novel syndrome that affects the brain, kidney and blood

Pediatrics and Medical Genetics and The Simon Winter Institute for Human Genetics, Bnai Zion Medical Center, Haifa, Israel

4 Subjects, 2 Control

-

Case series

Hypotonia, dandy-walker malformation

Panhypopituitarism, hearing impairment, cataracts and congenital glaucoma, renal failure, buphthalmos, corneal ectasia, narrow ears canal, high arched palate and undescended testes

Obstructive

WES, cytogenetics

aCGH/SNP array, microarray analysis, Sanger Sequencing

-

19q13.32 (c.T122A, p.L41Q in EXOC3L2)

Sudha et al., 2001 [245]

De novo interstitial long arm deletion of chromosome 3 with facial dysmorphism, Dandy-Walker variant malformation and hydrocephalus

Health Sciences Centre, University of Manitoba, Winnipeg, Canada

1 Subject, 2 Parents

German-Swiss

Case study

Dandy walker—cerebellar malformations, macrocrania

Coarse facial features, developmental delay

Obstructive

Cytogenetics

Karyotyping, FISH analysis utilizing WCP

De novo

46,XX,del(3)(q25.1q25.33) de novo

Traversa et al., 2019 [246]

Prenatal whole exome sequencing detects a new homozygous fukutin (FKTN) mutation in a fetus with an ultrasound suspicion of familial Dandy-Walker malformation

Fondazione IRCCS Casa Sollievo della Sofferenza, Laboratory of Clinical Genomics, San Giovanni Rotondo (FG), Italy

1 Subject, 2 Parents

Italian

Case study

Dandy walker—cerebellar malformations

 

Obstructive

WES

Sanger sequencing

-

9q31.2 (c.G898A, p.G300R in FKTN)

Yahyaoui et al., 2011 [48]

Neonatal carnitine palmitoyltransferase II deficiency associated with Dandy-Walker syndrome and sudden death

Clinical Laboratory, Carlos Haya University Hospital, Málaga, Spain

1 Subject

Moroccan

Case study

Dandy-Walker malformation

Hypoketotic hypoglycemia, severe hepatomuscular symptoms, cardiac abnormalities

-

TGS

-

-

1p32.3 (c.534_558del25bpinsT, p.L178_I186delinsF of CPT2)

Zaki, et al., 2015 [247]

Dandy-Walker malformation, genitourinary abnormalities, and intellectual disability in two families

National Research Centre, Cairo, Egypt

3 Subjects

Egyptian

Case series

Intellectual disability, Dandy-Walker malformation

Genitourinary abnormalities, hearing deficit

Obstructive

TGS, cytogenetics

aCGH, CNV analysis

AR

Genetic analysis unrevealing

Zanni et al., 2011 [248]

FGF17, a gene involved in cerebellar development, is downregulated in a patient with Dandy-Walker malformation carrying a de novo 8p deletion

Bambino Gesù Pediatric Hospital, 4 Piazza S. Onofrio, Rome

1 Subject, 3 Controls

-

Case study

Hypotonia

Motor delay, gastroesophageal reflux and frequent gastrointestinal and respiratory infections, joint laxity, facial deformity

Obstructive

WGS, cytogenetics

aCGH,

FISH analysis using a locus-specific probe

De novo

8p21.3 (2.3 Mb deletion in 8p21.2-8p21.3; reduced levels of FGF17)

  1. Array comparative genomic hybridization (aCGH). Autosomal Dominant (AD). Autosomal Recessive (AR). Copy number variant (CNV). Fluorescence In Situ Hybridization (FISH). Multiplex ligation dependent probe amplification (MLPA). Next generation sequencing (NGS). Single nucleotide polymorphisms (SNP). Targeted exome sequencing (TES). Targeted genome sequencing (TGS). Whole chromosome probes (WCP). Whole exome sequencing (WES). Whole genome sequencing (WGS)