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Table 1 Aqueductal stenosis

From: The genetic basis of hydrocephalus: genes, pathways, mechanisms, and global impact

Citation

Title

Author affiliation

Case #

Ancestry

Study design

CNS phenotype

Non-CNS phenotype

Type of hydrocephalus

Genetic methodology

Genetic analysis

Inheritance

Genetic Findings

Alazami et al., 2019 [129]

A novel ISLR2-linked autosomal recessive syndrome of congenital hydrocephalus, arthrogryposis and abdominal distension

King Faisal Specialist Hospital and Research Center, Riyadh, Saudi Arabia

2 Subjects, 8 Controls

Saudi

Case series

Generalized hypotonia, diminished reflexes

Arthrogryposis and abdominal distension

Obstructive

WES

Autozygome analysis; Variant analysis

AR

13q21.32 (c.652 T > C, p.Y218H in PCDH9); 15q24.1 (c.1660delT, p.W554Gfs*40 in ISLR2)

Allocco et al., 2019 [130]

Recessive Inheritance of Congenital Hydrocephalus with Other Structural Brain Abnormalities Caused by Compound Heterozygous Mutations in ATP1A3

Yale University, New Haven, CT, United States

1 Subject, 2 Parents

Caucasian

Case study

Open schizencephaly, type 1 Chiari malformation, and dysgenesis of the corpus callosum

–

Obstructive

WES

CNV, Sanger sequencing

AR

19q13.2 (p.R19C in exon 2 and p.R463C in exon 11 of ATP1A3)

Chassaing et al., 2007 [131]

Germinal mosaicism and familial recurrence of a SOX2 mutation with highly variable phenotypic expression extending from AEG syndrome to absence of ocular involvement

Hôpital Purpan, Toulouse, France

1 Subject, 1 Control

–

Case study

Brain malformations, corpus callosum hypoplasia

Ocular dysgenesis, male genital tract malformations, postnatal growth retardation, and facial dysmorphic features

Obstructive

TGS

–

AD

3q26.33 (deletion within SOX2)

Cox et al., 1997 [132]

VACTERL with hydrocephalus in twins due to Fanconi anemia (FA): mutation in the FAC gene

Royal Postgraduate Medical School, Hammersmith Hospital, London, United Kingdom

2 Subjects, 2 Parents

South African Ashkenazi Jew

Case study

Isolated hydrocephalus

Absent thumb, pericardial effusion, tracheo-esophageal fistula, pulmonary dysgenesis, intestinal malrotation, ectopic kidney, tetralogy of fallot

Obstructive

TGS

–

AR

9q22.32 (IVS4 + 4 A to T splice mutation in intron 4 of FAC)

De Keersmaecker et al., 2013 [133]

Prenatal diagnosis of MPPH syndrome

University Hospitals, Leuven, Belgium

1 Subject

–

Case study

Polymicrogyria

Postaxial polydactyly

Obstructive

Cytogenetics, TGS

aCGH

–

–

Escobar et al., 2009 [134]

Significant phenotypic variability of Muenke syndrome in identical twins

St. Vincent Children's Hospital, Indianapolis, Indiana, USA

2 Subjects

–

Case study

Coronal craniosynostosis, porencephalic cyst, and absence of the corpus callosum

Bilateral sensorineural hearing loss, tracheoesophageal fistula, asd, vsd

Obstructive

TGS

–

De novo

4p16.3 (c.C749G, p.P250R in FGFR3 gene)

Gomy et al., 2008 [135]

Two new Brazilian patients with Gómez-López-Hernández syndrome: reviewing the expanded phenotype with molecular insights

School of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto, Brazil

2 Subjects

Brazilian

Case study

Craniosynostosis, craniofacial anomalies, trigeminal anesthesia, cerebellar ataxia, intellectual disability, and rhombencephalosynapsis

Scalp alopecia, developmental delay

Obstructive

TGS

Direct sequencing

-

No pathogenic mutations

Isik et al., 2018 (78) [136]

Clinical and genetic features of L1 syndrome patients: Definition of two novel mutations

Faculty of Medicine, Ege University, Izmir, Turkey

2 Subjects

-

Case series

Intellectual disability, microcephaly, spasticity

Developmental delay, broad forehead, hypertelorism, low set ears, long philtrum, bilateral adducted thumbs, atrial septal defect

Obstructive

Molecular analysis, unspecified

De-novo mutation analysis, Segregation analysis

X-linked

Xq28 (c.3166 + 1G > A; c.749delG, p.S250Tfs*51)

Jin et al., 2019 [137]

SLC12A ion transporter mutations in sporadic and familial human congenital hydrocephalus

Yale University School of Medicine, New Haven, CT, USA

2 Subjects

-

Case series

Agenesis of the corpus callosum, and schizencephaly

-

Obstructive

WES

CNV

De novo

15q14 (c.C1814T, p.Pr05L in SLC12A6); 5p15.33 (SLC12A7 deletion)

Jouet et al., 1993 [138]

Refining the genetic location of the gene for X linked hydrocephalus within Xq28

University of Cambridge

4 Subjects

-

Case series

Seizures, intellectual disability, callosal agenesis, aqueduct stenosis, spastic paraparesis

Adducted thumbs

Obstructive

Genotyping

Two point/multipoint linkage analysis

X-linked recessive

Xq28 (HSAS gene proximal to

DXS605 & coincident with DXS52)

Khattab et al., 2011 [139]

A de novo 3.54 Mb deletion of 17q22-q23.1 associated with hydrocephalus: a case report and review of literature

Yale University School of Medicine, New Haven, Connecticut 06520–8064, USA

1 Subject

-

Case study

Generalized hypotonia

Sutural separation with full anterior fontanel, small palpebral fissures, hypertelorism, low-set ears, micrognathia, downturned corners of the mouth, arachnodactyly of fingers and toes, contractures of joints

Obstructive

TGS, cytogenetics

aCGH; FISH

De novo

17q22-q23.1 deletion

Lamont et al., 2016 [140]

Expansion of phenotype and genotypic data in CRB2-related syndrome

Alberta Children's Hospital Research Institute, University of Calgary, Calgary, Alberta, Canada

5 Subjects

-

Case series

Hypoplastic cerebellum,

Subependymal heterotopias, hypertonia

Bilateral echogenic kidneys, hypoplastic right lung, hypoplastic right pulmonary artery, dextroposition of the heart, ASD defect, low visual acuity, irregular retinal pigmentation, mild optic atrophy

Obstructive

WES

NGS, Sanger sequencing, SNP genotyping array

AR, De novo, maternal

9q33.3 (CRB2 mutations (p.C620S; p.R628C; p.C629S; p.G1036Afs*42; p.R1248Q; p.W498C; p.R633W; p.E643A; p.W759X; p.N800K; p.D1076A; p.C1098Sfs*53; p.R1115C; p.C1129R)); 4q27 (BBS7 mutation (p.R238Efs*59)); 1q25.2 (NPHS2 mutation (p.R229Q))

Lyonnet et al., 1992 [141]

The gene for X-linked hydrocephalus maps to Xq28, distal to DXS52

Hôpital des Enfants-Malades, Paris, France

58 Subjects

French, German

Case series

Intellectual disability and spasticity

Abnormal flexion deformity

Of the thumbs

-

Haplotyping

Pairwise and multipoint linkage analysis

X-linked

HSAS1 localized to Xq28 and distal to DXS52

Maurya et al., 2021 [142]

A case report of Arnold Chiari type 1 malformation in acromesomelic dwarf infant

Seth Gordhandas Sunderdas Medical College and King Edward Memorial Hospital, Mumbai, Maharashtra, India

1 Subject

-

Case study

Arnold Chiari type 1 malformation, atrophy of both lentiform nuclei, paucity of white matter in bilateral occipital regions, thinning of the corpus callosum

Acromesomelic dwarfism

Obstructive

WGS

NGS

AR

4p16.3 (c.G1138A, p.G380R in exon 9 of FGFR3); 9p23 (c.G394A, p.G132S in exon 5 of MPDZ); 7q31.1 (c.T4133A, p.L1378H in exon 27 of LAMB1); 17q25.3 (c.A1G, p.M1V in exon 2 of GAA)

Porayette et al., 2013 [143]

Novel mutations in geleophysic dysplasia type 1

Boston Children's Hospital, Harvard Medical School, Boston, MA, USA

1 Subject

-

Case study

Isolated hydrocephalus

Large head, prominent flat forehead, hypertelorism, wide mouth with long thin lips, full cheeks, downturned corners of the mouth, short palpebral fissures, long flat philtrum, grooved tongue with tongue-tie, low-set ears, small nose with depressed nasal bridge, short neck, mild abdominal distension, symmetrical shortening of all extremities, aortic stenosis, pulmonary valve stenosis

Obstructive

TGS

-

AD

9q34.2 (c.1934G > A, p.R645H in exon 13 and mutation in intron 8) of ADAMTSL2)

Serville et al., 1993 [144]

Prenatal exclusion of X-linked hydrocephalus-stenosis of the aqueduct of Sylvius sequence using closely linked DNA markers

Unité de Recherches sur les Handicaps Génétiques de l'Enfant INSERM U-12, Hôpital des Enfants-Malades, Paris, France

2 Subject

-

Case series

Cortex thinning, spasticity, cerebral palsy, intellectual disability, corpus callosum agenesis, aqueductal stenosis

Bilateral adducted thumbs

Obstructive

Southern blotting, DNA probes; autoradiography

Linkage analysis

X-linked recessive

Xq28 region linkage with the HSAS locus

Strain et al., 1994 [145]

Genetic heterogeneity in X-linked hydrocephalus: linkage to markers within Xq27.3

Human Genetics Unit, University of Edinburgh, Western General Hospital, UK

4 Subjects, Controls used

-

Case series

Septum pellucidum and corpus callosum agenesis, aqueductal stenosis

Adducted thumbs

Obstructive

Chromosomal banding

Two-point/multipoint linkage analysis

-

Linkage to DXS548 and FRAXA loci in Xq27.3

Tzschach et al., 2012 [146]

Interstitial 9q34.11-q34.13 deletion in a patient with severe intellectual disability, hydrocephalus, and cleft lip/palate

Institute of Human Genetics, University of Tuebingen, Tuebingen, Germany

1 Subject, 2 Parents

-

Case study

Intellectual disability

Cleft lip and palate, bilateral talipes equinovarus, kyphoscoliosis, psychomotor development delay, short stature, bilateral convergent strabismus, dysmorphic facial features

Obstructive

Chromosome analysis

SNP array

-

9q34.11–q34.13 (3.7 Mb deletion)

Verbeek et al., 2012 [147]

COL4A2 mutation associated with familial porencephaly and small-vessel disease

Erasmus University Medical Center, Rotterdam, The Netherlands

10 Subjects, Controls used

Caucasian, Afghani

Case series

Porencephaly, periventricular leukoencephalopathy, cerebellar hypoplasia, cerebral atrophy

Developmental delay, feeding difficulties, bilateral ica, ophthalmological signs

Obstructive

TGS

SNP array

AD

13q34 (c.4165G4A, p.G1389R in exon 44 and c.3206delC in exon 34 in COL4A2)

Vieira et al., 2012 [148]

Primary ciliary dyskinesia and hydrocephalus with aqueductal stenosis

Hospital de Dona Estefânia, Centro Hospitalar de Lisboa Central, Lisbon, Portugal

1 Subject

Gypsy

Case study

Aqueductal stenosis

Dextrocardia, a complex heart malformation, situs inversus, intestinal malrotation

Obstructive

TES

-

AR

No mutations in DNAI1 or DNAH5

  1. Amplification created restriction site (ACRS). Array comparative genomic hybridization (aCGH). Arthrogryposis multiplex congenital (AMC). Atrial septal defect (ASD). Autosomal dominant (AD). Autosomal recessive (AR). Copy number variant (CNV). Fluorescein isothiocyanate (FITC). Fluorescence-assisted mismatch analysis (FAMA). Fluorescence In Situ Hybridization (FISH). Heteroduplex analysis (HA). Internal carotid artery (ICA). Next generation sequencing (NGS). Restriction endonuclease fingerprinting (REF). Single nucleotide polymorphisms (SNP). Single nucleotide primer extension (SNuPE). Single-strand conformation polymorphisms (SSCP). Targeted exome sequencing (TES). Targeted genome sequencing (TGS). Whole exome sequencing (WES). Whole genome sequencing (WGS)