Table 1 List of gene official symbols and aliases
From: Developmental changes in the transcriptome of the rat choroid plexus in relation to neuroprotection
Gene-symbol | Aliases | mRNA ID |
|---|---|---|
ABC transporters | ||
Abcb1b | Mdr1, Pgy1, Abcb1 | NM_012623 |
Abcc1 | Mrp1 | NM_022281 |
Abcc3 | Mlp2, Mrp3 | NM_080581 |
Abcc4 | Mrp4 | NM_133411 |
Abcc5 | Mrp5, Abcc5a | NM_053924 |
Abcc9 | Sur2 | NM_013040 |
Abcc10 | Mrp7 | NM_001108201 |
Abcg2 | BCRP1 | NM_181381 |
Solute carriers: organic anion transporting polypeptides | ||
Slco2a1 | Slc21a2, Matr1 | NM_022667 |
Slco1a3 | Slc21a4 | NM_030837 |
Slco1a4 | Slc21a5, Oatp2 | NM_131906 |
Slco1a5 | Slc21a7, Oatp3 | NM_030838 |
Slco2b1 | Slc21a9, moat1 | NM_080786 |
Slco3a1 | Slc21a11, Oatp3a1 | NM_177481 |
Slco1c1 | Bsat1, Slc21a14, Oatp14 | NM_053441 |
Solute carriers: organic anion /cation/zwitterion transporters | ||
Slc22a2 | OCT2 | NM_031584 |
Slc22a4 | Octn1 | NM_022270 |
Slc22a5 | Octn2, CT1, UST2r | NM_019269 |
Slc22a6 | Oat1, Paht, Roat, Orctl1 | NM_017224 |
Slc22a7 | Oat2 | NM_053537 |
Slc22a8 | Oat3, Roct | NM_031332 |
Slc22a12 | Rst | NM_001034943 |
Slc22a15 | Â | NM_001107707 |
Slc22a17 | Boct, 24p3R | NM_177421 |
Slc22a25 | Ust1, Slc22a9 | NM_138908 |
Solute carriers: nucleoside and peptide transporters | ||
Slc15a2 | Pept2 | NM_031672 |
Slc28a2 | Cnt2 | NM_031664 |
Slc28a3 | Cnt3 | NM_080908 |
Slc29a1 | Ent1 | NM_031684 |
Slc29a2 | Ent2 | NM_031738 |
Slc29a3 | Ent3 | NM_181639 |
Slc29a4 | Â | NM_001105911 |
Cytochrome P450s, epoxide hydrolases, flavin-containing monooxygenases | ||
Cyp1b1 | Â | NM_012940 |
Cyp2d4 | Cyp2d6, Cyp2d18 Cyp2d22 | NM_138515 |
Cyp2j4 | CYP2J2 | NM_023025 |
Cyp2u1 | Â | NM_001024779 |
Ephx1, transcript variant 1 | MEH8 | NM_001034090 |
Ephx1, transcript variant 2 | Â | NM_012844 |
Ephx2 | CEH, SEH | NM_022936 |
Fmo1 | RFMO1A | NM_012792 |
Fmo2 | Â | NM_144737 |
Fmo3 | Â | NM_053433 |
Fmo4, transcript variant 1 | Â | NM_144562 |
Fmo4, transcript variant 2 | Â | NM_144561 |
Fmo5 | Â | NM_144739 |
UDP-glucuronosyltransferases and sulfotransferases transferases | ||
Ugt1a1 | UDPGT 1-1 | NM_012683 |
Ugt1a2 | UDPGT 1-2 | NM_201423 |
Ugt1a3 | UDPGT 1-3 | NM_201424 |
Ugt1a5 | UDPGT 1-5 | NM_001039549 |
Ugt1a6 | UDPGT 1-6 | NM_057105 |
Ugt1a7c | UDPGT 1-7 | NM_130407 |
Ugt1a8 | UDPGT 1-8 | NM_175846 |
Ugt1a9 | Â | NM_201425 |
Ugt2a1 | Ugt2a1p | NM_022228 |
Sult1a1 | Stm, Stp1, ASTIV, Mx-ST, PST-1 | NM_031834 |
Sut1d1 | Sultn, Sult-n | NM_021769 |
Sult5a1 | Â | NM_001106194 |
Glutathione S-transferases (GSTs) and glutathione-synthesis related genes | ||
Gsta1 | Â | NM_017013 |
Gsta2 | Â | LOC494499 |
Gsta3 | Yc1 | NM_031509 |
Gsta4 | Â | NM_001106840 |
Gstm1 | Â | NM_017014 |
Gstm2 | Â | NM_177426 |
Gstm3 | GstYb4 | NM_020540 |
Gstm4 | Â | NM_001024304 |
Gstm5 | Â | NM_172038 |
Gstm7 | Â | NM_031154 |
Gstp1 | Gst3, Gstp, Gstp2 | NM_012577 |
Mgst1 | Â | NM_134349 |
Mgst2 | Â | NM_001106430 |
Mgst3 | Â | NM_001191594 |
Gss | Â | NM_012962 |
Gclc | Glclc | NM_012815 |
Gclm | Glclr | NM_017305 |
Heme oxygenases, biliverdin reductase | ||
Hmox1 | Ho1, Heox, Hmox, Ho-1, HEOXG | NM_012580 |
Hmox2 | Ho-2 | NM_024387 |
Hmox3 | HO-3 | AF058787 |
Blvra | Â | NM_053850 |
Blvrb | Â | NM_001106236 |
Glutathione peroxidases and –reductase | ||
Gpx1 | GSHPx, GSHPx-1 | NM_030826 |
Gpx3 | Gpxp, GPx-P, GSHPx-3, GSHPx-P | NM_022525 |
Gpx4 | Phgpx, gpx-4, snGpx | NM_017165 |
Gpx7 | Â | NM_001106673 |
Gpx8 | Â | NM_001106411 |
Gsr | Â | NM_053906 |
Sod1 | CuZnSOD | NM_017050 |
Sod2 | Â | NM_017051 |
Sod3 | Â | NM_012880 |
Cat | CS1, Cas1,Catl, Cs-1, Cat01 | NM_012520 |
Regulatory transcription factors | ||
Nr1i2 | PXR | NM_052980 |
Nr1i3 | CAR | NM_022941 |
Rxra | Â | NM_012805 |
Ppara | Nr1c1, Ppar | NM_013196 |
Nr3c1 | GR, Grc, Grl | NM_012576 |
Cebpb | LAP, TCF5, Il6dbp, NF-IL6 | NM_024125 |
Ahr | AhR | NM_013149 |
Arnt | Arnt1 | NM_012780 |
Nfe2l2 | Nrf2 | NM_031789 |
Hif1a | MOP1 | NM_024359 |
Tp53 | p53, Trp53 | NM_030989 |
Monoamine oxidases, dopa decarboxylase, catechol-O-methyltransferase | ||
Maoa | Mao | NM_033653 |
Maob | Â | NM_013198 |
Ddc | Â | NM_012545 |
Comt | Â | NM_012531 |
Tight junction-associated genes | ||
Cldn1 | Â | NM_031699 |
Cldn2 | Â | NM_001106846 |
Cldn3 | Â | NM_031700 |
Cldn6 | Â | NM_001102364 |
Cldn9 | Â | NM_001011889 |
Cldn10 | Â | NM_001106058 |
Cldn11 | Â | NM_053457 |
Cldn12 | Â | NM_001100813 |
Cldn19 | Â | NM_001008514 |
Cldn22 | Â | NM_001110143 |
Marveld1 | Mrvldc1 | NM_001107590 |
Marveld2 | Mrvldc2, Tric | NM_001108936 |
Marveld3 | Â | NM_001109132 |
Ocln | Â | NM_031329 |
Lsr | Lisch7 | NM_032616 |
Tjp1 | ZO-1 | NM_001106266 |
Tjp2 | ZO-2 | NM_053773 |
Tjp3 | ZO-3 | NM_001108073 |
F11r | Jam1 | NM_053796 |
Jam2 | Â | NM_001034004 |